Galaxy Screencasts for Genome Research Publication

To view screencasts download QuickTime player.

Interface

Screencast 1 - Introduction to Galaxy Interface (3 min 54 sec | 20 MB)

Tool tutorials

Screencast 2 - Getting Data (4 min 38 sec | 37 MB)
SCreencast 3 - Getting ENCODE data (2 min 01 sec | 16 MB)
SCreencast 4 - Editing & Modifying Queries (3 min 48 sec | 19 MB)
SCreencast 5 - Filtering, Sorting, Joining and Comparing (7 min 22 sec | 63 MB)
SCreencast 6 - Fetch Sequences and Alignments (5 min 12 sec | 20 MB)
SCreencast 7 - Getting Genomic Scores (3 min 26 sec | 26 MB)

Interval Operation Tutorial

Also see Learn/Interval Operations.

Screencast 8 - Preparing data (2 min 01 sec | 8 MB)
Screencast 9 - Intersect and Subtract (7 min 40 sec | 28 MB)
Screencast 10 - Merge and Concatenate (6 min 23 sec | 41 MB)
Screencast 11 - Base coverage and Complement (2 min 05 sec | 4 MB)
Screencast 12 - Coverage (2 min 14 sec | 14 MB)
Screencast 13 - Cluster (6 min 44 sec | 30 MB)
Screencast 14 - Join (3 min 36 sec | 36 MB)

Finding and analyzing Non-Gencode ESTs

Screencast 15A - Finding NonGencode ESTs Part A (6 min 51 sec | 54 MB)
- EST file
Screencast 15B - Finding NonGencode ESTs Part B (3 min 48 sec | 32 MB)
Screencast 16 - Looking for protein-coding transcripts among Non-Gencode ESTs (4 min 48 sec | 56 MB)
Screencast 17 - Finding Non-Gencode ESTs under purifying selection (3 min 28 sec | 29 MB)

Developers' How To

Screencast 18 - How to install Galaxy on your machine (3 min 23 sec | 28 MB)
Screencast 19 - How to add tool to Galaxy (8 min 52 sec | 29 MB)

Interactions between UCSC and Galaxy